Sample information |
|
| Picture |
|
|---|---|
| Location | |
| Collection date | 08/31/2031 |
| Captive / Cultivated? | Wild-caught |
| Group | Hamburg Area High School |
| Observations | Red with black spots, Wings under a hard shell, ~2-3mm diameter (circular/oval-shaped shell) |
| Putative identification | Arthropoda Insecta Coleoptera Coccinellidae Harmonia Harmonia axyridis |
Methods |
|
| Extraction kit | DNeasy (Qiagen) |
| DNA extraction location | Partial abdomen |
| Single or Duplex PCR | Duplex Reaction |
| Gel electrophoresis system | Standard electrophoresis system |
| Buffer | TBG |
| DNA stain | SYBR-SAFE |
| Gel images |
|
| Protocol notes | Standard. |
Results |
|
| Wolbachia presence | No |
| Confidence level | Low |
| Explanation of confidence level | While the lab itself did work, and everything went smoothly. Due to the blurriness of the lines in our gel and its images, it is hard to tell whether the Wolbachia node should or should not be present. This could also have occurred during the process of creating the gel. |
| Wolbachia 16S sequence | |
| Arthropod COI sequence | Download AB1
TTATGGGCAGGAATAGTAGGAACATCGTTAAGTATTTTAATTCGGTTAGAATTAGGAACTAGAGGAA GATTAATTGGAAACGACCAAATTTATAATATAATTGTTACAGCTCATGCTTTCATTATAATTTTCTTTATAGTAATACCT ATTATAATTGGGGGTTTTGGAAATTGATTAGTTCCTTTAATAATTGGAGCTCCTGATATAGCATTTCCACGATTAAATAA CATAAGATTTTGACTTTTACCCCCTGCTTTAACTCTTTTAATTTTAAGAACAATCGTAGAAATAGGGGCAGGAACAGGAT GAACTGTTTACCCTCCTCTTTCTTCTAATTTAACACATAATGGGCCTTCAGTAGATTTAGTGATTTTTAGTTTACATTTA GCAGGAATTTCCTCAATTTTAGGTGCAGTAAATTTCATTTCAACTATTATAAATATACGTCCATTTGGTATAATACTTGA TAAAACTCCTTTATTTGTATGATCTGTTCTTATTACAGCAATTCTTTTATTACTATCACTACCAGTTCTTGCAGGAGCAA TTACTATACTATTAACTGACCGAAACTTAAATTCTTCTTTTTTTGACCCAACCGGTGGGGGAGACCCAATTTTATACCAA CATTTATTTTGATTTTTTGC
BLAST at The Wolbachia Project BLAST at NCBI
|
| Summary | The Harmonia axyridis was found to be negative for Wolbachia. |


Wolbachia prevalence in arthropod’s: A look into Penn State’s ecosystems
The Labor Day Ant
(no title)