Diptera 6

Sample information

Picture
Photos by: Kaya S
Location
Collection date 09/09/2024
Captive / Cultivated? Wild-caught
Group Bluegrass Community and Technical College
Observations

The specimen was collected using a flying insect trap containing banana peels and vinegar per the Arthropod Collection Traps Guide provided by the Wolbachia Project. The trap was hung from a tree branch adjacent to a small creek in a suburban backyard for two days. The trap was cut open and the (predominantly flying) insects were removed and preserved in 70% alcohol. The trap was then placed on the ground for an additional three days capturing additional insects. These insects included both crawling and flying insects. These insects were removed and preserved in 70% alcohol. 

The specimen was identified as a Diptera using the iNaturalist app.

Putative identification Arthropoda Hexapoda Insecta Diptera

Methods

Extraction kit DNeasy (Qiagen) blood and tissue kit
DNA extraction location Abdomen
Single or Duplex PCR Single Reaction
Gel electrophoresis system Standard electrophoresis system
Buffer TAE
DNA stain Ethidium Bromide
Gel images
Protocol notes

GoTaqGreen polymerase was used. Reaction conditions were per Lab 3: PCR (Wolbachia Project Guide) for single reaction PCRs (separate reactions were run with the Wolbachia primers and the cytochrome oxidase primers). The PCR reaction volume was 25 uL. 5 uL of each reaction was run on a 2% agarose gel. The relevant lanes, lanes 3 and 4, for the specimen (#6) are boxed

Results

Wolbachia presence No
Confidence level High
Explanation of confidence level

No PCR product was obtained in the reaction using the Wolbachia primers (WO, Lane 3), while the reaction using the cytochrome oxidase 1 (CO, Lane 4) produced a ~700 bp product, which is the correct size for the CO1 product, indicating the DNA isolated from the specimen is of suitable quality for PCR. All control reactions (Lanes 9 through 14) worked as they should. The positive control is DNA extracted from a control insect infected with Wolbachia, while the negative control is DNA extracted from an uninfected insect. Both controls were provided by the Wolbachia Project

Wolbachia 16S sequence
The PCR product was not sequenced
BLAST at The Wolbachia Project   BLAST at NCBI
Arthropod COI sequence
The PCR product was not sequenced
BLAST at The Wolbachia Project   BLAST at NCBI
Summary The Diptera was found to be negative for Wolbachia.
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