Sample information |
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Picture |
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Location | |
Collection date | 11/02/2030 |
Captive / Cultivated? | Wild-caught |
Group | Benedictine University |
Observations | collected by Fall 2024 students |
Putative identification | Arthropoda |
Methods |
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Extraction kit | DNeasy (Qiagen) blood and tissue kit. |
DNA extraction location | Whole arthropod |
Single or Duplex PCR | Single Reaction |
Gel electrophoresis system | Edvotek Gel Electrophoresis |
Buffer | TAE |
DNA stain | SYBR Safe |
Gel images |
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Protocol notes | |
Results |
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Wolbachia presence | No |
Confidence level | High |
Explanation of confidence level | It was above 99% |
Wolbachia 16S sequence |
>w8R.ab1 (353 bp) CACCGTGGCGTGTGCCACGATTACTAGCGATTCCACTTCATGCACTCGAGTTGCAGAGTACAATCCGAACTGAGATGGCT TTTAAGGGATTAGCTTAGCCTCGCGACTTTGCAGCCCATTGTAGCCACCATTGTAGCACGTGTGTAGCCCACTCCATAAG GGCCATGATGACTTGACATCATCCCCACCTTCCTCCAGTTTATCACTGGCAGTTTCCTTAAAGTCCCCAGCATTACCTGA TGGTAACTAAGGATGAGGGTTGCGCTCGTTGCGGGACTTAACCCAACATCTCACGACACGAGCTGACGACAGCCATGCAA CACCTGTGTGAAACCCGGCCGAACCGACCCTAT
BLAST at The Wolbachia Project BLAST at NCBI
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Arthropod COI sequence |
66-A_AP2_Co1_R (1).ab1 (598 bp) TGTATTTAAATTTCGATCAGTTAAAAGTATATGTAATAGCTCCTGCTAACACAGGAAGAGAAAGAAGAAGTAATACTGCA GTAATTAAAACAGCTCAAACAAATAAAGGTATTTGGTCTATTTTTATTTCTGAAGATCGTATATTTATAATTGTTGAAAT GAAATTTACAGCACCTAGAATTGATGAAATCCCTGCTATATGAAGTCTAAAAATAGATAAATCTACTGAAGATCCTCTAT GAGCAATATTAGAAGATAAAGGAGGGTATACTGTTCACCCAGTTCCAGTTCCATTTTCTACAATTCTTCTTATTAGTAAT AGAGATAATGATGGGGGTAAAAATCAGAATCTTATATTATTTATTCGTGGGAATGCTATATCAGGTGCTCCTAATATTAG TGGAACTAATCAATTTCCAAATCCACCAATTATGATTGGCATAACTATAAAGAAAATTATAATAAAAGCGTGTGCAGTTA CAACAACATTGTAAATTTGATCATTCCCAATTAGAGCATTTGTATTTCCTAATTCTGCTCGAATTAAAAGTCTTAGGGAT GTTCCTAGTATTCCTGACCATGCTCCAAATAAAAAATA
BLAST at The Wolbachia Project BLAST at NCBI
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Summary | The Arthropoda was found to be negative for Wolbachia. |