Sample information |
|
| Picture |
|
|---|---|
| Location | |
| Collection date | |
| Captive / Cultivated? | Wild-caught |
| Group | College of Eastern Idaho |
| Observations | |
| Putative identification | Arthropoda Hexapoda Insecta Diptera Chironomidae Chironomus Chironomus riparius |
Methods |
|
| Extraction kit | Edwards Buffer |
| DNA extraction location | Whole arthropod |
| Single or Duplex PCR | Single Reaction |
| Gel electrophoresis system | Standard electrophoresis system |
| Buffer | TAE |
| DNA stain | |
| Gel images |
|
| Protocol notes | |
Results |
|
| Wolbachia presence | No |
| Confidence level | Medium |
| Explanation of confidence level | |
| Wolbachia 16S sequence | |
| Arthropod COI sequence |
GNATAGTGGGAACTTCATTAAGAATGCTTATTCGAGCAGAATTAGGACGACCCGGAACTTTCATTGGAGATGACCAAATTTATAATGTTGTAGTTACTGCACATGCTTTTATTATAATTTTTTTCATAGTTATACCAATTTTAATTGGAGGATTCGGAAACTGACTTGTCCCCCTAATACTTGGAGCACCTGACATAGCTTTTCCTCGAATAAATAATATAAGTTTCTGACTTTTACCCCCCTCTCTTACTCTTCTTCTTTCTAGTTCTTTCGTAGAAAATGGAGCAGGAACTGGGTGAACTGTTTATCCACCTCTATCATCAGCAATTGCTCATAGAGGAGCTTCTGTTGACTTAGCTATTTTTTCTTTACATTTAGCTGGAATTTCATCAATTCTTGGATCAGTAAATTTTATTACTACAGTTATTAATATGCGAGCTAATGGTATTACACTTGATCGAATACCTTTATTTGTCTGATCAGTAGTAATTACAACTGTTCTTTTACTTCTTTCTCTTCCAGTCTTAGCTGGAGCCATTACTATACTATTAACAGACCGAAATTTAAATACTTCATTTTTTGATCCTGCTGGTGGGGGTGATCCTATTTTATACCAACACTTATTTTGA
BLAST at The Wolbachia Project BLAST at NCBI
|
| Summary | The Chironomus riparius was found to be negative for Wolbachia. |
Ladybug
Armadillidium vulgare #1 GRP30
Drosophila Melanogaster
Armadillidium vulgare GRP7 (1)