Pholcus phalangioides GRP15

Sample information

Picture
Photos by: Jeremiah P.
Location
Collection date 05/14/2025
Captive / Cultivated? Wild-caught
Group California Academy of Mathematics and Science
Observations

I found this cellar spider below a mirror on the wall in a household bathroom. I collected it at about 8 am.

 

Putative identification Arthropoda Chelicerata Arachnida Araneae Pholcidae Pholcus Pholcus phalangioides

Methods

Extraction kit DNeasy (Qiagen)
DNA extraction location Whole arthropod
Single or Duplex PCR Duplex Reaction
Gel electrophoresis system Standard electrophoresis system Bio-Rad
Buffer 1X TAE
DNA stain 100X Fast Blast
Gel images
Protocol notes

Gel electrophoresis lanes
1. PCR molecular weight ruler (1000, 700, 500, 200, 100 bp)
2. DNA sample of pholcus phalangioides
3. DNA sample of sphaerophoria scripta
4. Wolbachia-positive (16S) arthropod control
5. Wolbachia-negative (16S) arthropod control
7. Arthropod-positive (CO1) DNA control
8. Arthropod-negative (CO1) DNA control

Analysis

The pholcus phalangioides sample had a band matching the Wolbachia-positive control’s band (16S), but not a band matching the arthropod-positive control’s upper band (CO1; like how the arthropod-negative control had no bands), so pholcus phalangioides seems to be a non-arthropod and Wolbachia-positive.

Results

Wolbachia presence Yes
Confidence level Low
Explanation of confidence level

The Wolbachia-positive and Wolbachia-negative controls might not have completely worked because they’re arthropods, but didn’t have bands matching the arthropod-positive control’s upper band (CO1 or the arthropod gene, which has a larger molecular weight) out of its two bands (the lower band with a smaller molecular weight in common with the Wolbachia-positive control should be 16S or the Wolbachia gene). This is similar to our results where pholcus phalangioides tested arthropod-negative, which can’t be trusted because all spiders are arthropods. Pholcus phalangioides could’ve tested arthropod-negative because the CO1 primers failed to get the CO1 gene on the pholcus phalangioides DNA amplified during PCR. So, a band matching the arthropod-positive control’s CO1 band wasn’t visible on the gel for pholcus phalangioides.

Wolbachia 16S sequence
Arthropod COI sequence
Summary The Pholcus phalangioides was found to be postive for Wolbachia.
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