Clement tyska bcc bio 101 wolbachia study

Sample information

Picture
Photos by: Clement T
Location
Collection date 10/01/2025
Captive / Cultivated? Wild-caught
Group Berkshire Community College
Observations

Found in Richmond Massachusetts alive outside a large barn on the side of a lightly forested field sample harvested 10/1/25

Putative identification Arthropoda Insecta Hymenoptera Vespidae Polistinae Polistes Polistes fuscatus

Methods

Extraction kit Monarch DNA extraction (NEB)
DNA extraction location Abdomen
Single or Duplex PCR Duplex Reaction
Gel electrophoresis system Edvotek Gel Electrophoresis
Buffer 1X TAE
DNA stain SYBR Safe
Gel images
Protocol notes

Are duplex PCR ran on October 16th that used the primers for Wolbachia 16s forward and reverse and the primers for arthropod _f (LCO1490) and Arthropod_R (HCO2198) They were ran at an annealing temperature of 49 degrees Celsius this was conducted twice once for are first round and second round to be u used in the gel electrophoresis trial

Are first gel image was taken on october 23 10/23/25 and was run on 125 volts for 20 minutes the DNA ladder used : new England Biolabs 1 kb plus DNA ladder for safe stains (product#N0559S)

are second gel image taken on 11/6/25 using the Edvotek gel Electrophoresis was ran at 125 volts for 25 minutes the DNA ladder used was the new England bio labs 1 KB plus DNA ladder for safe stains (product # N0559S)

Results

Wolbachia presence Unknown
Confidence level Low
Explanation of confidence level

It is unclear if the arthropod has Wolbachia because the two gels show different results.

On the first gel, My confidence level of my negative wolbachia result is high. All my controls showed to be correct on the gel image and all protocols were followed.

My confidence level for the second round of gel Electrophoresis is low even though my sample tested positive for Wolbachia and arthropod DNA our gel image showed signs of contamination (bands in the water lane) and our positive and negative arthropod controls did not show bands after the gel was ran.

Wolbachia 16S sequence
Arthropod COI sequence
Summary
Report Inappropriate Post