Sample information |
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Picture |
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Location | |
Collection date | 11/14/2023 |
Captive / Cultivated? | Wild-caught |
Group | Walton High School |
Observations | Under larger rocks, dry leaves. Black in color, antennae, 3 segments in body, 0.9 cm. *Initial ID was Lasius niger, however after blast, we concluded that the arthropod was Formicia subsericea. |
Putative identification | Arthropoda Hexapoda Insecta Hymenoptera Formicidae Lasius Lasius niger |
Methods |
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Extraction kit | DNeasy (Qiagen) blood and tissue kit |
DNA extraction location | Abdomen |
Single or Duplex PCR | |
Gel electrophoresis system | MiniPCR |
Buffer | TBE |
DNA stain | GelGreen |
Gel images |
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Protocol notes | Extracted reproductive organs from body. Ran gel. |
Results |
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Wolbachia presence | Unknown |
Confidence level | High |
Explanation of confidence level | The Wolbachia gel did not run properly so we are unable to provide conclusive results. |
Wolbachia 16S sequence | |
Arthropod COI sequence | Download FASTA
Download AB1
>ZS_2_Lasius-CO1F.ab1 (601 bp) TTCTATAAGTATAATTATTCGTTTAGAATTAGGTTCATCTAATTCATTAATCAATAATGATCAAATTTAT AATTCTTTAGTAACTAATCACGCTTTTATTATAATTTTTTTCATAGTAATACCATTTATAATTGGTGGGT TTGGTAATTTTCTAATTCCTTTAATACTAGGATCACCAGACATAGCATACCCTCGTATAAATAATATAAG ATTTTGACTCTTACCTCCTTCAATTACTCTTTTACTTTTAAGAAATTTTATTAATGATGGAACAGGAACA GGATGGACTATTTATCCTCCCTTATCCTCTAATATTTTTCATAGTGGTCCTTCTGTAGACTTAACAATTT TTTCTCTTCATATTGCAGGTATATCCTCAATTTTAGGAGCAATTAATTTTATTTCAACAATTCTTAATAT ACATCATAAAAATTTTTCTATTGATAAAATTCCTTTACTCGTATGATCAATTTTAATTACAGCTATCTTA CTTCTATTATCCTTACCTGTATTGGCCGGAGCTATTACTATACTATTAACTGATCGAAATTTAAATACTT CATTCTTTGATCCTTCGGGAGGAGGCGATCCAATTCTATAT
BLAST at The Wolbachia Project BLAST at NCBI
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Summary |