Musca Domestica (Cluster Fly)

April 2, 2024

Sample information
Picture
Photos by: Isabella M.
Location
Collection date 03/24/2024
Captive / Cultivated? Wild-caught
Group River Valley Community College
Observations

Arthropod appeared slow moving during capture.
Putative identification Arthropoda Hexapoda Insecta Diptera Muscidae Musca Musca domestica

Methods
Extraction kit DNeasy (Qiagen) blood and tissue kit
DNA extraction location Abdomen
Single or Duplex PCR Single Reaction
Gel electrophoresis system MiniOne
Buffer TAE
DNA stain GelRed
Gel images
Protocol notes

Results
Wolbachia presence Yes
Confidence level Medium
Explanation of confidence level

One positive and one negative control worked as expected. Any lack in confidence is attributed to a failed positive arthropod control and no positive result for the DNA control. It is expected that this is a result of a pipetting error when running the DNA extraction and isolation. Aside from this, the PCR ran as expected and the results were positive for both CO1 and 16S rRNA for Wolbachia.
Wolbachia 16S sequence Download AB1
GGGGGGGGTTGGCGGATTCACAGGTGTTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCATCCTTAGTTACCATCAGGTAATGCTGGGGACTTTAAGGAAACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGATGTCAAGTCATCATGGCCCTTATGGAGTGGGCTACACACGTGCTACAATGGTGGCTACAATGGGCTGCAAAGTCGCGAGGCTAAGCTAATCCCTTAAAAGCCATCTCAGTTCGGATTGTACTCTGCAACTCGAGTGCATGAAGTTGGAATCGCTAGTAATCGTGGATCAGCATGCCACGGTGAATACGTTCTCGGGTCTTGTACACACTGCCCGTCACGCCATGGGAATTGGTTTCACTCGAAGCTAACC
BLAST at The Wolbachia Project   BLAST at NCBI
Arthropod COI sequence Download AB1
CCATTTGGTATTTTATTTTTGGAGCATGAGCAGGAATAGTAGGAACTTCTTTAAGAATTTTAATTCGAGCAGAACTAGGACATCCTGGAGCACTAATTGGAGATGACCAGATCTATAATGTAATTGTAACAGCACATGCTTTTGTTATAATTTTCTTTATAGTAATACCAATTATAATTGGTGGGTTTGGAAATTGATTAGTTCCTTTAATACTAGGAGCTCCTGATATAGCATTTCCTCGAATAAATAATATAAGCTTTTGACTTTTACCTCCTGCTCTTACGCTATTGTTAATAAGCAGTATAGTGGAAAACGGAGCTGGAACAGGCTGAACTGTTTACCCACCACTATCTTCTAACATTGCTCATGGAGGAGCTTCTGTTGATTTAGCTATTTTTTCACTTCATCTAGCAGGAATTTCTTCAATTTTAGGAGCAGTAAATTTTATTACTACTGTAATTAATATGCGATCTACAGGTATTACTTTTGATCGAATACCCTTATTTGTTTGATCAGTAGTAATTACAGCTTTATTACTTCTTTTATCACTTCCTGTACTAGCAGGAGCAATTACAATATTATTAACAGATCGAAACTTAAATACTTCATTCTTTGACCCTGCGGGAGGAGGAGATCCAGTTCTATACCAACATTTATTTTGATTTTTTGGTCACCTGGAAAAGTTAAA
BLAST at The Wolbachia Project   BLAST at NCBI
Summary The Musca domestica was found to be postive for Wolbachia.
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