Sample information |
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| Picture |
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|---|---|
| Location | |
| Collection date | 03/07/2024 |
| Captive / Cultivated? | Wild-caught |
| Group | KantiWil |
| Observations |
The Tachypodoiulus niger was found under the deadwood. |
| Putative identification | Arthropoda Myriapoda Diplopoda Julida Julidae Tachypodoiulus Tachypodoiulus niger |
Methods |
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| Extraction kit | Instagene Matrix |
| DNA extraction location | Rear half |
| Single or Duplex PCR | Duplex Reaction |
| Gel electrophoresis system | Standard electrophoresis system |
| Buffer | TAE |
| DNA stain | SYBR Safe |
| Gel images |
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| Protocol notes | |
Results |
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| Wolbachia presence | No |
| Confidence level | High |
| Explanation of confidence level |
High=>Bacause the cytochrome oxidase I are present |
| Wolbachia 16S sequence | |
| Arthropod COI sequence | Download FASTA
Download AB1
TAAGCATACTAATCCGAATAGAACTCTCTTACCCCGGAAGATTAATCGGAGATGACCAAATCTATAATGTTATCGTAACTGCTCATGCTTTTGWAATAATCTTTTTTATAGTTATACCTATTATAATTGGAGGGTTTGGAAACTGGCTTGTTCCTTTAATGTTAGGGGCTCCTGATATGGCTTTCCCTCGACTTAATAATATAAGCTTTTGACTTTTACCCCCTTCTTTATTTCTTTTATTAATATCCTCTGCGGTTGAAAAAGGAGCAGGAACAGGATGAACAGTCTATCCCCCTTTAGCAAATAATGTATCTCACTCAGGGCCCTCAGTAGATATAGCAATCTTTTCCCTTCATTTAGCAGGGGCTTCGTCAATCTTAGGAGCTATTAATTTTATTACAACTATTATTAACATGCGCTCAATAGGAATAGGATTCGAACATTTGCCTTTGTTTGTTTGAGCTGTAAAAGTAACAGCTATTTTACTTCTTTTATCTTTGCCTGTTTTGGCTGGAGCTATTACAATACTCTTAACAGATCGTAATTTTAATACCTCTTTCTTTGATCCTTCTGGCGGGGGAGATCCTATCTTATACCAACATCTTTTTTGATTTTTGGTCACTGKAA
BLAST at The Wolbachia Project BLAST at NCBI
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| Summary | The Tachypodoiulus niger was found to be negative for Wolbachia. |
Oxidus gracilis, VG2
Oniscus asellus, VG1
Tachypodoiulus niger LL2
Oniscus asellus LL1
Tachypodoiulus niger LB1