Sample information |
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Picture |
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Location | |
Collection date | 09/03/2024 |
Captive / Cultivated? | Wild-caught |
Group | Benedictine University |
Observations | |
Putative identification | Arthropoda Hexapoda Insecta Hymenoptera Vespidae Vespula Vespula germanica |
Methods |
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Extraction kit | DNeasy (Qiagen) blood and tissue kit |
DNA extraction location | Abdomen |
Single or Duplex PCR | Single Reaction |
Gel electrophoresis system | Standard electrophoresis system |
Buffer | TAE |
DNA stain | SYBR Safe |
Gel images |
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Protocol notes | |
Results |
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Wolbachia presence | No |
Confidence level | Low |
Explanation of confidence level | I had no band for Wolbachia in the gel electrophoresis. |
Wolbachia 16S sequence |
Didn't have one
BLAST at The Wolbachia Project BLAST at NCBI
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Arthropod COI sequence | Download FASTA
>63-D_AB1_Co1_R (1).ab1 (671 bp) GGAAATGATGATATAAATTGGGTCCCCCCACCTGCAGGATCGAAAAAAGATGTGTTTAAGTTCCGATCTGTTAAAAGTAT AGTAATTGCTCCTGCAAGAACTGGTAGTGATAATAGAAGAAGAATTGCTGTAATTAAAATTGATCATGTGAATAAAGGAA GAAAATTTAATGAATGTGTTTTTGTGTGTATATTTAAAATAGTAACGATAAAATTAATTGATCCTATAATTGATGAAATT CCAGCAATATGAATTGAAAAAATTCCTAAATCTACAGATGGAGAATCATGACCAACAATAGAAGATAAAGGAGGGTATAA AGTTCATCCTGTTCCTACCCCTGTTCCAATAAAATTTCTTAAAATTAGTAAAAATAATGAAGGAGGGAGTAATCAAAATC TTATATTATTTATTCGAGGAAATGCTATATCAGGTACACCTAGTATTAAAGGGATTAATCAGTTTCCAAATCCTCCTACT AAAAAAGGTATAACTATAAAGAAAATTATAATAAAGGCATGAGCTGTAATAATTGTATTATAAATTTGATCATTATTAAT TAAGGCCCCAGGAGATCTTAATTCTAAGCGAATAATTATTCTTATTGAAGCTCCTAAAGTCCCTGCCCATAAAGCAAAAA TAAAATATAATGTTCCAATATCTTTATGTTT
BLAST at The Wolbachia Project BLAST at NCBI
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Summary | The Vespula germanica was found to be negative for Wolbachia. |