Umpachene Falls Caddisfly

Sample information

Picture
Entry by: Angie F.
Location
Approximate location: 42.09, -73.27
Collection date 10/05/2026
Captive / Cultivated? Wild-caught
Group Berkshire Community College
Observations

The specimen was found flopping on a rock near the river.

 

 

 

Putative identification Arthropoda Insecta Trichoptera

Methods

Extraction kit Monarch DNA extraction (NEB)
DNA extraction location Abdomen
Single or Duplex PCR Duplex Reaction
Gel electrophoresis system Edvotek Gel Electrophoresis
Buffer 1X TAE
DNA stain SYBR Safe
Gel images
Protocol notes

 

  • We used a DNA extraction protocol based on the insect adaptation of New England Biolabs’ Monarch Spin gDNA Extraction kit (Product # T3010).
  • The specimen was incubated for 45 minutes in a hot water bath at 56 degrees C.
  • Our first PCR reaction was set up on 10/20/26 and was a duplex reaction because we used both the Arthropod CO1 and Wolbachia 16S primers together
  • Used an annealing temperature of 49 degrees Celsius.
  • Used this Taq polymerase: New England Biolabs OneTaq Hot Start Quick-Load 2X Master Mix with Standard Buffer (#M0488S)
  • Our first Gel image was taken on 10/27/2026 and was run at 125 volts for 34 minutes
    • Used this DNA Ladder: New England Biolabs 1 kb Plus DNA Ladder for Safe Stains (product #N0559S)

Results

Wolbachia presence No
Confidence level Medium
Explanation of confidence level

I am moderately confident that the results of my experiment are correct. All the control lanes appeared as expected; however, it is very hard to tell from the gel electrophoresis whether my specimen contained Wolbachia or not. The 438 bp band for my specimen seems very faint, appearing as a halo, and it is possible that I am just unable to see the band, making my result seem like a false negative. It could also be possible that the 708 bp is just very luminescent, making it seem like there may be a block below it, but it can’t be certain.

Wolbachia 16S sequence
Arthropod COI sequence
Summary The Trichoptera was found to be negative for Wolbachia.
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