Sample information |
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Picture |
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Location | |
Collection date | 06/06/2022 |
Captive / Cultivated? | Wild-caught |
Group | Pingry School |
Observations | The arthropod specimen was collected from a grass habitat directly adjacent a forest and was observed nectaring on white clover blossoms. |
Putative identification | Arthropoda Hexapoda Insecta Diptera Syrphidae Sphecomyia Sphecomyia vittata |
Methods |
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Extraction kit | DNeasy (Qiagen) |
DNA extraction location | Abdomen |
Single or Duplex PCR | Single Reaction |
Gel electrophoresis system | Standard electrophoresis system |
Buffer | TAE |
DNA stain | SYBR Safe |
Gel images |
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Protocol notes | The Gel Imaging System was programmed incorrectly, resulting in an image of inappropriately high contrast. This experiment was conducted without controls. |
Results |
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Wolbachia presence | Yes |
Confidence level | High |
Explanation of confidence level | Sequencing data and gel electrophoresis results reveal the presence of Wolbachia 16S in the arthropod specimen. |
Wolbachia 16S sequence | Download FASTA
Download AB1
GCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCATCCTTAGTTACCATCAGGTAATGCTGGGGACTTTAAGGAAACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGATGTCAAGTCATCATGGCCCTTATGGAGTGGGCTACACACGTGCTACAATGGTGGCTACAATGGGCTGCAAAGTCGCGAGGCTAAGCTAATCCCTTAAAAGCCATCTCAGTTCGGATTGTACTCTGCAACTCGAGTGCATGAAGTTGGAATCGCTAGTAATCGTGGATCAGCACGCCACGGTGAATACGTTCTCGGGTCTTGTACACACTGCCCGTCACGCCATGGGAATTGGT
BLAST at The Wolbachia Project BLAST at NCBI
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Arthropod COI sequence | Download FASTA
Download AB1
CGGACTTGAGCTGGATAGTAGGAACATCCTTAAGAATTTTAATTCGTGCAGAATTAGGCCATCCTGGAGCATTAATTGGAGATGACCAAATTTATAATGTTATTGTTACTGCTCATGCTTTTGTTATAATTTTTTTTATAGTTATACCAATTATAATTGGAGGATTTGGAAATTGATTAGTTCCTTTAATATTAGGAGCCCCAGATATAGCCTTTCCTCGAATAAATAATATAAGTTTTTGATTACTACCCCCTTCTTTAACTTTATTATTAGTAAGAAGTATAGTAGAAAATGGAGCTGGAACGGGATGAACTGTTTATCCTCCTCTTTCTGCAAGAATTGCCCATGGAGGTGCTTCTGTTGATTTAGCAATTTTTTCTCTACATTTAGCAGGAATATCTTCTATTTTAGGAGCAGTAAATTTTATTACTACTGTTATTAATATACGGTCTACTGGAATTTCATATGATCGAATACCATTATTTGTATGATCAGTAGTAATTACAGCCCTATTACTTTTACTATCATTACCTGTATTAGCGGGAGCAATTACAATACTTTTAACTGATCGAAATTTAAATACCTCTTTTTTTGATCCAGCAGGTGGGGGAGATCCTATTCTTTACCAACATTTATTTTGA
BLAST at The Wolbachia Project BLAST at NCBI
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Summary | The Sphecomyia vittata was found to be postive for Wolbachia. |