Sample information |
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Picture |
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Location | |
Collection date | 09/29/2024 |
Captive / Cultivated? | Wild-caught |
Group | College of Eastern Idaho |
Observations | Very small approximately 1 mm in length, dark color. Found in bark of Douglas-fir tree with infestation markings, under bark above the phloem many same insects found.
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Putative identification | Arthropoda Hexapoda Insecta Thysanoptera Phlaeothripidae Leptothrips |
Methods |
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Extraction kit | Edwards Buffer |
DNA extraction location | Whole arthropod |
Single or Duplex PCR | Single Reaction |
Gel electrophoresis system | Standard electrophoresis system |
Buffer | TBE |
DNA stain | GelGreen |
Gel images |
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Protocol notes | |
Results |
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Wolbachia presence | No |
Confidence level | High |
Explanation of confidence level | PCR of similar species at same time were positive. |
Wolbachia 16S sequence | |
Arthropod COI sequence |
TTGATCTGGAATTTGTGGATTATTTATAAGAATAATTATTCGTTTAGAATTAATACAACCAGGTAACGTTTTTTTATCTGGTCAAGCTTATAATGTAATTGTAACTAATCATGCTTTTATAATAATTTTTTTTACTATTATACCTATTATAATAGGAGGGTTTGGAAATTGATTAGTTCCTATTATACTAGGTAGACCAGATATATGTTACCCACGTATAAATAATATAAGATTTTGATTATTACCTCCTTCTCTATTTCTTCTCTTATTTAGAATAATTTTAGAAGAAGGTTCAGGAACTGGATGAACGGTTTATCCCCCTTTATCATCTTTAAGATCAGGAATTTCTGTTGATATAACTATTATTTCATTACATATTGCTGGTGTTTCTTCTTTATTAGGATCTATTAATTTTATTTCTACAGTATTTAACATATCTAATTTAAGAACTGAATATTATACTTTATTTGTTTGATCAATTGTAGTTACTTCTTTACTATTATTACTTTCTTTACCTGTATTAGCAGGTGCTTTAACAATATTATTGGTTGATCGAAATTTAAACACTAGTTATTTTGATCCTTCAGGTGGAGGAGATCCTACTTTATATCAACATTTATTTTGATTTTTTGGTC
BLAST at The Wolbachia Project BLAST at NCBI
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Summary | The Leptothrips was found to be negative for Wolbachia. |