Sample information |
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| Picture |
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|---|---|
| Location | |
| Collection date | 09/02/2025 |
| Captive / Cultivated? | Wild-caught |
| Group | Benedictine University |
| Observations | I caught my Arthropod nead some tall grasses by a tree. This also happens to be the type of habitat in which my arthropod naturally resides. |
| Putative identification | Arthropoda Arachnida Opiliones Phalangiidae Opilio Opilio parietinus |
Methods |
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| Extraction kit | DNeasy (Qiagen) blood and tissue kit. |
| DNA extraction location | Whole arthropod |
| Single or Duplex PCR | Single Reaction |
| Gel electrophoresis system | Standard electrophoresis system |
| Buffer | TAE |
| DNA stain | SYBR Safe |
| Gel images |
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| Protocol notes | An error occurred during the step where the master mix was added to the DNA, which affected the samples before they were loaded onto the electrophoresis gel. Adding too much mastermix skewed the results and prevented any Arthropod DNA from showing in the results.I obtained a negative result for my arthropod sample, which was likely due to an error during preparation of the master mix |
Results |
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| Wolbachia presence | Yes |
| Confidence level | Medium |
| Explanation of confidence level | I obtained a negative result for my arthropod sample, which was likely due to an error during preparation of the master mix. Despite this, I was still able to get some Wolbachia DNA. In my BLAST results, I had a percent identity of 99.73%. |
| Wolbachia 16S sequence | Download FASTA
Download AB1
GGTGAGCTGTTGATCTCATATTGGATTAACGTCGACGCCGTGGCGTGCTGATCCACGATTACTAGCGATTCCAACTTCAT GCACTCGAGTTGCAGAGTACAATCCGAACTGAGATGGCTTTTAAGGGATTAGCTTAGCCTCCCGACTTTGCAGCCCATTG TAGCCACCATTGTAGCACGTGTGTAGCCCACTCCATAAGGGCCATGATGACTTGACATCATCCCCACCTTCCTCCAGTTT ATCACTGGCAGTTTCCTTAAAGTCCCCAGCATTACCTGATGGTAACTAAGGATGAGGGTTGCGCTCGTTGCGGGACTTAA CCCAACATCTCACGACACGAGCTGACGACAGCCATGCAACACCTGTGTGAAACCCGGACGAACCGACCCTATCCCTTCGA ATAGGTATG
BLAST at The Wolbachia Project BLAST at NCBI
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| Arthropod COI sequence |
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| Summary | The Opilio parietinus was found to be postive for Wolbachia. |


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