Sample information |
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Picture |
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Location | |
Collection date | 09/05/2022 |
Captive / Cultivated? | Wild-caught |
Group | College of Eastern Idaho |
Observations |
Description: Bright green, small leaf like body Body length: .76 cm. Found by Chase Hartzell UTM Coordinates: 12T 0491965 4797196 Arthropod: + Wolbachia: + |
Putative identification | Arthropoda Hexapoda Insecta Hemiptera Membracidae Tortistilus Tortistilus wickhami |
Methods |
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Extraction kit | Edwards Buffer |
DNA extraction location | Abdomen |
Single or Duplex PCR | Duplex Reaction |
Gel electrophoresis system | Standard electrophoresis system |
Buffer | TAE |
DNA stain | GelGreen |
Gel images |
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Protocol notes | DNA Annotated protocol in Wolbachia project Lab2: DNA Extraction Edward’s Buffer |
Results |
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Wolbachia presence | Yes |
Confidence level | High |
Explanation of confidence level | We tested and retested our sample and then re did the protocol and did the PCR again and sent it to the Wolbachia Project Lab. It was sequenced and then confirmed on Blast as a match. |
Wolbachia 16S sequence |
>Wol17 GTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCATCCTTAGTTGCCATCAGGTAATGCTGAGCACTTTAAGGAAACTCCCAGTGATAAGCTGGAGGAAGATGGGGATGATGTCAAGTCATCATGGCCTTTATGAAGTGGGCTACACACGTGCTACAATGGTGTCTACAATGGGCTGCAAGGTGCGCAAGCCTAAGCTAATCCCTAAAAGACATCTCAGTTCGGATTGTACTCTGCAACTCGAGTGCATGAAGTTGGAATCGCTAGTAATCGTGGATCAGCATGCCACGGTGAATACGTTCTCGGGTCTTGTACACACTGCCCGTCACGCCATGGGAATTGGTTT
BLAST at The Wolbachia Project BLAST at NCBI
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Arthropod COI sequence |
>Arthopod17_CO1F ACTTAGTGTTATTATTCGAGTTGAACTAGGGCAACCTGGACCATTACTTAATAATGATCAAATTTATAATACAATTATCACTTCTCATGCCTTCATTATAATTTTCTTCATAGTTATACCAATTATGATTGGGGGTTTTGGTAATTGATTGTTACCTATTATAATTGGGGCTCCAGATATGGCTTTTCCACGAATAAACAATATAAGATTTTGATTATTACCCCCATCTATTAGATTAATTTTAATTAGATCCATAGTAGAAACAGGGGCTGGGACGGGATGAACAGTATACCCACCATTATCAAGAAATATTGCTCACTCAGGGGCTAGAGTAGACTTTGCTATTTTTTCATTACATTTAGCTGGAATTTCATCTATTCTAGGAGCAATTAATTTCATTACAACTATAATAAACATGCGAGTACAAGGTATAAATTTAGATAAAACACCTCTATTTGTTTGATCAGTAGTTATCACTGCATTCTTACTCCTTATATCATTACCAGTTCTAGCGGGAGCAATTACCATGCTATTAGCTGACCGAAATATAAATACTTCA
BLAST at The Wolbachia Project BLAST at NCBI
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Summary | The Tortistilus wickhami was found to be postive for Wolbachia. |