Sample information |
|
Picture |
|
---|---|
Location | |
Collection date | 09/05/2022 |
Captive / Cultivated? | Wild-caught |
Group | College of Eastern Idaho |
Observations | Stonefly Nymph- Under rock in the river Description: Brown with a red hue Body length: 1.27 cm. Found by Danny Ahlstrom |
Putative identification | Arthropoda Hexapoda Insecta Ephemeroptera Ephemerellidae Drunella Drunella coloradensis |
Methods |
|
Extraction kit | Edwards Buffer |
DNA extraction location | Abdomen |
Single or Duplex PCR | Duplex Reaction |
Gel electrophoresis system | Standard electrophoresis system |
Buffer | TAE |
DNA stain | GelGreen |
Gel images |
|
Protocol notes | Wolbachia Project PCR Primers for both Wolbachia and CO1 Arthropod. |
Results |
|
Wolbachia presence | No |
Confidence level | High |
Explanation of confidence level | Wolbachia Project PCR Primers for both Wolbachia and CO1 Arthropod. |
Wolbachia 16S sequence | |
Arthropod COI sequence |
GGACTTCGTTGAGGTTACGCATCCAGGCAGAACTAGGGCAACCTGGGTCAGTNNTGGGANATGACCGNNCNANAATGGCATTGTAACGNCCATGCCTTCATTATAATTTTCTTTATGGTAATACCTATTATAATTGGGGGATTCGGGAATTGATTAGTTCCGTTAATGCTTGGTGCCCCCGATATAGCATTTCCCCGAATGAACAATATAAGCTTTTGGTTGTTACCTCCTGCCCTAACGTTATTATTGGCTAGAAGTATAGTGGAAAGAGGGGCAGGAACCGGTTGGACAGTTTACCCCCCCTTGGCTTCCGGCATTGCCCATGCTGGGGGATCTGTAGATCTTGCTATCTTTTCGCTTCACTTAGCGGGAGTCTCCTCTATTCTCGGAGCAGTAAATTTTATTACAACCACCATTAATATACGAGCCAGAGGAATAACTATGGACCGAATTCCCCTATTTGTATGGTCCGTTTTAATTACCGCAATCCTCCTTCTTCTCTCCTTACCGGTCCTTGCTGGGGCTATTACTATGCTTCTTACAGACCGTAACTTAAATACCTCGTTCTTTGACCCGGCGGGTGGGGGAGACCCTATTTTATACCAACATCT
BLAST at The Wolbachia Project BLAST at NCBI
|
Summary | The Drunella coloradensis was found to be negative for Wolbachia. |