Sample information |
|
| Picture |
|
|---|---|
| Location | |
| Collection date | 09/29/2024 |
| Captive / Cultivated? | Wild-caught |
| Group | College of Eastern Idaho |
| Observations | Very small approximately 1 mm in length, dark color. Found in bark of Douglas-fir tree with infestation markings, under bark above the phloem many same insects found. |
| Putative identification | Arthropoda Insecta Thysanoptera Phlaeothripidae Leptothrips |
Methods |
|
| Extraction kit | Edwards Buffer |
| DNA extraction location | Whole arthropod |
| Single or Duplex PCR | Single Reaction |
| Gel electrophoresis system | Standard electrophoresis system |
| Buffer | TBE |
| DNA stain | GelGreen |
| Gel images |
|
| Protocol notes | |
Results |
|
| Wolbachia presence | No |
| Confidence level | High |
| Explanation of confidence level | PCR of similar species at same time were positive. |
| Wolbachia 16S sequence | |
| Arthropod COI sequence |
CTGGAATTTGTGGATTATTTATAAGAATAATTATTCGTTTAGAATTAATACAACCAGGTAACGTTTTTTTATCTGGTCAAGCTTATAATGTAATTGTAACTAATCATGCTTTTATAATAATTTTTTTTACTATTATACCTATTATAATAGGAGGGTTTGGAAATTGATTAGTTCCTATTATACTAGGTAGACCAGATATATGTTACCCACGTATAAATAATATAAGATTTTGATTATTACCTCCTTCTCTATTTCTTCTCTTATTTAGAATAATTTTAGAGGAAGGTTCAGGAACTGGATGAACGGTTTATCCTCCTTTATCATCTTTAAGATCAGGAATTTCTGTTGATATAACTATTATTTCATTACATATTGCTGGTGTTTCTTCTTTATTAGGATCTATTAATTTTATTTCTACAGTATTTAACATATCTAATTTAAGAACTGAATATTATACTTTATTTGTTTGATCAATTGTAGTTACTTCTTTACTATTATTACTTTCTTTACCTGTATTAGCAGGTGCTTTAACAATATTATTGGTTGATCGAAATTTAAACACTAGTTATTTTGATCCTTCAGGTGGAGGAGATCCTACTTTATATCAACATTTAT
BLAST at The Wolbachia Project BLAST at NCBI
|
| Summary | The Leptothrips was found to be negative for Wolbachia. |

Bombus impatients (Eastern Bumblebee)
Agelenopis
My Data
Common Eastern Bumble Bee (Bombus impatiens)
American Bird