Sample information |
|
| Picture |
|
|---|---|
| Location | |
| Collection date | 09/04/2025 |
| Captive / Cultivated? | Wild-caught |
| Group | St. Albans School |
| Observations | I collected this carpenter ant in the woods on STA’s campus. I collected it in the late morning in late summer/early fall and the temperature was around 70 degrees F outside. |
| Putative identification | Arthropoda Insecta Hymenoptera |
Methods |
|
| Extraction kit | DNeasy (Qiagen) |
| DNA extraction location | Abdomen |
| Single or Duplex PCR | Single Reaction |
| Gel electrophoresis system | MiniPCR |
| Buffer | TBE |
| DNA stain | GelGreen |
| Gel images |
|
| Protocol notes | I crushed the carpenter ant up really well and cut off its legs and head so I could isolate the abdomen. I got a band for CO1, meaning that I was able to extract arthropod DNA from my ant. |
Results |
|
| Wolbachia presence | No |
| Confidence level | High |
| Explanation of confidence level | All of the controls worked as expected and I did not get a band for my sample. Other people in the class got bands and were positive for Wolbachia, so I’m very confident. |
| Wolbachia 16S sequence | |
| Arthropod COI sequence | Download FASTA
Download AB1
nnnTTTGATCnGGNnTAATTGGTTCTTCnnnnAGAATAATTATTCGATTAGAATTAGGATCCCCTGATTCACTAATTCTTAATGATCAAACCTTCAATACTATCGTTACAAGCCATGCTTTTATTATAATCTTTTTCATAGTTATACCTTTTATAATTGGAGGnTTTGGTAACTTCTTAGTACCCTTAATACTTGGGTCTCCTGATATAGCCTATCCACGCATAAATAACATAAGATTCTGATTACTACCCCCTTCAATTTCTCTATTAATCTTAAGAAATTTTATTAATGAAGGATCAGGAACAGGTTGAACTATTTATCCCCCCCTATCATCTAATACCTTTCATAGTGGTCCCTCTATTGATTTAACTATTTTTTCCCTTCATATTGCCGGAATATCATCAATTCTAGGGGCAATCAATTTTATTTCAACAATTTTAAACATACATAAnTCTAATATTACCTTAGATAAAAnTCCCCTATTAGTAnGATCTATTCTTATCACTGCTATTCTCCTCCTCCTCTCCCTTCCTATTCTTnnAGGAnCTATTACAATACTACTTACnGAnCGAAAnCTCnnTACTTCAnTTTTTnnnCCCTCAGGAnGAGGAnAnCCTnnTCTATnnnnnCACTTnnTTT
BLAST at The Wolbachia Project BLAST at NCBI
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| Summary | The Hymenoptera was found to be negative for Wolbachia. |


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