Sample information |
|
Picture |
![]() |
---|---|
Location | |
Collection date | 09/18/2024 |
Captive / Cultivated? | Wild-caught |
Group | St. Paul Academy and Summit School |
Observations | Small, black, ant-looking, has 6 legs and three segments(head, abdomen, head), most likely has antennas but is a bit crushed. The bug has no wings. Caught in the SPA courtyard during fall, it was about 70 degrees F. The courtyard is grassy and open. |
Putative identification | Arthropoda Hexapoda Insecta Hymenoptera Formicidae Tetramorium Tetramorium forceps |
Methods |
|
Extraction kit | DNeasy (Qiagen) blood and tissue kit |
DNA extraction location | Whole arthropod |
Single or Duplex PCR | Single Reaction |
Gel electrophoresis system | MiniPCR |
Buffer | TBE |
DNA stain | SeeGreen |
Gel images |
![]() |
Protocol notes | My results were in lane 5. |
Results |
|
Wolbachia presence | No |
Confidence level | High |
Explanation of confidence level | My testing for Wolbachia worked from start to end and had many different controls that worked. From this, I know that the process worked and the results are fine. However, during my DNA sequence analysis, the Q values were very low, so my DNA sequence may not be correct. |
Wolbachia 16S sequence | |
Arthropod COI sequence | Download FASTA
Download AB1
NNNNNNTAAGTATAATTATTCGACTAGAATTAGGATCATGTATTTCTTTAATTAATAATGATCAAATTTATAATATCCTA GTAACAAGCCNTGCTTTTATTTTAATTTTTTTTATACTAATGCTTTTTATAATCGGGGGATTTGGAAATTTTTTATTTCC TTTAATACTAGGAACTCCAGATATACCTTACCCCAAAAAAAAAAAAAAAAAATTTGACCTCCCCCCCCATCTATTAAAAT TATTTTAGTTAAAAAATTTTATAATTCCGGGGTTGGGATGGGGNAACTATCCACCCTCCCCTACTACCTATTTTTCCTCA GGGACCATCAATTACCCTTCAAATTTTTTCCCCTNTTTTGCTGAAAATTTTTTCTTTTTAAGAGACAAAAATTTTTTTTT TTCCCTCCTCAATTAACCCCATTTAAAACTAAACCTACGT
BLAST at The Wolbachia Project BLAST at NCBI
|
Summary | The Tetramorium forceps was found to be negative for Wolbachia. |