Sample information |
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Picture |
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Location | |
Collection date | 09/06/2022 |
Captive / Cultivated? | Wild-caught |
Group | College of Eastern Idaho |
Observations | Scolops sulcipes- Partridge Bug- Crawling in dirt in the shade by the path Description: Curious, Dirt Brown with patterned markings, very camouflaged Body length: 0.9cm Found by Carly Hartzell UTM Coordinates: 12T 0492041 4797270 Arthropod: ? Wolbachia: + |
Putative identification | Arthropoda Hexapoda Insecta Hemiptera Dictyopharidae Scolops Scolops sulcipes |
Methods |
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Extraction kit | Edwards Buffer |
DNA extraction location | Abdomen |
Single or Duplex PCR | Duplex Reaction |
Gel electrophoresis system | Standard electrophoresis system |
Buffer | TAE |
DNA stain | GelGreen |
Gel images |
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Protocol notes | DNA Annotated protocol in Wolbachia project Lab2: DNA Extraction Edward’s Buffer |
Results |
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Wolbachia presence | Yes |
Confidence level | High |
Explanation of confidence level | We tested and retested as well as put a sample together for the Wolbachia Project Lab to identify and we received a sequence that was a match. |
Wolbachia 16S sequence |
>Wol13 CGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCATCCTTAGTTGCTATCAGGTAATGCTGAGTACTTTAAGGAAACTGCCAGTGATAAGCTGGAGGAAGGTGGGGATGATGTCAAGTCATCATGGCCTTTATGGAGTGGGCTACACACGTGCTACAATGGTGTCTACAATGGGCTGCAAGGTGCGCAAGCCTAAGCTAATCCCTAAAAGACATCTCAGTTCGGATTGTACTCTGCAACTCGAGTACATGAAGTTGGAATCGCTAGTAATCGTGGATCAGCATGCCACGGTGAATACGTTCTCGGGTCTTGTACACACTGCCCGTCACGCCATGGGAATTGGT
BLAST at The Wolbachia Project BLAST at NCBI
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Arthropod COI sequence |
>CO1_13_CspecF GTTTATGATCAGGATTACTAGGAACAATAAGAAGAATAATTATTCGTATAGAACTTTTACAACCAGGATCAATAATTAAAAATGACCAAATTTATAATACCATTGTTACATCACATGCCTTCATTATAATTTTCTTTATAGTTATACCAATTATAATTGGAGGATTCGGAAATTGATTAGTTCCAATAATAATTGGTGCACCAGATATAGCATTTCCACGAATAAATAACATAAGATTTTGATTATTACCCCCCTCAATAACATTACTAATCATAAGATCAATTACAGGATCAGGAACAGGAACAGGATGAACAATTTATCCCCCCTTATCTAACCAAATAGCACATTCAGGGCCATCAGTTGACTTAACTATTTTTTCATTACATATTGCAGGAATTAGATCAATTCTAGGAGCAATTAACTTTATCTCAACTATTACAAATATACGACCAAAACCTATAACAATAGAAAATACACCACTTTTCTGTTGATCAGTTCTAATTACAGCAATTTTATTATTAGTATCATTACCAATTCTAGCAGGAGCTATTACTATACTATTAACGGATCGAAACTTTAATACATCATTTTTTGACCCATCAGGAGGAGGGGACCCAATCTTATATCAACACCTATTTTG
BLAST at The Wolbachia Project BLAST at NCBI
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Summary | The Scolops sulcipes was found to be postive for Wolbachia. |